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Most software packages are provided as a module and must be loaded.

Available Software

HSUper has its modules hierarchically organized by compiler and MPI implementation. The command module avail shows all modules that are available in the current environment. If you are missing a software package, it might not be available for the selected compilers or MPI implementation. module spider <modulename> is useful to find out how a module could be loaded. More information on the module system is provided by module --help and the Lmod documentation.

If you cannot find a package using module spider <modulename>, verify if you have loaded the USER-SPACK module.

Currently available software:

  • Apptainer (Singularity)
  • slurm
  • Lmod
  • tmux
  • Python 2.7/3.6 (python2, python3, …)
  • pip 9.0.3 (pip2, pip3, …)
  • GNU Debugger (gdb)
  • vim
  • tcsh
  • zsh

Modules:

  • OpenMPI
  • Intel® MPI Library (Intel oneAPI MPI)
  • Intel® oneAPI Math Kernel Library (Intel oneAPI MKL)
  • Intel® oneAPI Base Toolkit & HPC Toolkit
    • Intel oneAPI DPC++/C++ Compiler
    • Intel® C++ Compiler Classic
    • Intel® oneAPI Threading Building Blocks (Intel oneAPI TBB)
  • NVIDIA HPC SDK
    • NVIDIA C, C++, Fortran 77, Fortran 90 compilers
  • NVIDIA CUDA®
  • TensorFlow (TODO: coming soon)
  • R
  • gcc
  • cmake
  • ccmake (part of the cmake module)
  • eigen3
  • bison
  • flex
  • Python3
  • py-pybind
  • OpenCL
  • FTTW
  • LAPACK
  • ScaLAPACK
  • OpenFOAM
  • GNU Octave
  • preCICE
  • FEniCS / FEniCSx
  • gnuplot
  • Miniforge3 (Miniconda3)
  • Spack (USER-SPACK)